Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.28■□□□□ 0.04
NDNQ99608 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.28■□□□□ 0.04
NDNQ99608 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.28■□□□□ 0.04
NDNQ99608 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
NDNQ99608 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.28■□□□□ 0.04
NDNQ99608 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NDNQ99608 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NDNQ99608 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NDNQ99608 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 AC022144.1-201ENST00000602255 1580 ntBASIC15.28■□□□□ 0.04
NDNQ99608 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
NDNQ99608 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NDNQ99608 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.27■□□□□ 0.04
NDNQ99608 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.27■□□□□ 0.04
NDNQ99608 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NDNQ99608 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NDNQ99608 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.27■□□□□ 0.04
NDNQ99608 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.27■□□□□ 0.04
NDNQ99608 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.27■□□□□ 0.04
NDNQ99608 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
NDNQ99608 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.27■□□□□ 0.04
NDNQ99608 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.27■□□□□ 0.04
NDNQ99608 MEIS3P1-201ENST00000495167 958 ntBASIC15.27■□□□□ 0.04
NDNQ99608 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.27■□□□□ 0.04
NDNQ99608 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.27■□□□□ 0.04
NDNQ99608 SRD5A3P1-201ENST00000603021 949 ntBASIC15.27■□□□□ 0.04
NDNQ99608 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.27■□□□□ 0.04
NDNQ99608 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
NDNQ99608 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDNQ99608 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDNQ99608 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.27■□□□□ 0.03
NDNQ99608 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.27■□□□□ 0.03
NDNQ99608 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDNQ99608 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
NDNQ99608 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDNQ99608 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.27■□□□□ 0.03
NDNQ99608 DGCR9-201ENST00000609630 2415 ntBASIC15.27■□□□□ 0.03
NDNQ99608 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDNQ99608 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
NDNQ99608 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDNQ99608 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDNQ99608 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
NDNQ99608 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDNQ99608 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDNQ99608 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.27■□□□□ 0.03
NDNQ99608 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDNQ99608 BTBD7P1-201ENST00000447253 1453 ntBASIC15.27■□□□□ 0.03
NDNQ99608 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.27■□□□□ 0.03
NDNQ99608 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.27■□□□□ 0.03
NDNQ99608 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NDNQ99608 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NDNQ99608 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.26■□□□□ 0.03
NDNQ99608 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 AC006504.5-208ENST00000588784 2401 ntBASIC15.26■□□□□ 0.03
NDNQ99608 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NDNQ99608 AL356585.2-201ENST00000625078 2396 ntBASIC15.26■□□□□ 0.03
NDNQ99608 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.26■□□□□ 0.03
NDNQ99608 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NDNQ99608 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 AC104457.1-201ENST00000401024 814 ntBASIC15.26■□□□□ 0.03
NDNQ99608 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.26■□□□□ 0.03
NDNQ99608 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.26■□□□□ 0.03
NDNQ99608 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.26■□□□□ 0.03
NDNQ99608 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.26■□□□□ 0.03
NDNQ99608 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.26■□□□□ 0.03
NDNQ99608 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NDNQ99608 AL391069.4-201ENST00000609583 481 ntBASIC15.26■□□□□ 0.03
NDNQ99608 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
NDNQ99608 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.26■□□□□ 0.03
NDNQ99608 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 AL645728.2-202ENST00000641679 227 ntBASIC15.26■□□□□ 0.03
NDNQ99608 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NDNQ99608 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms