Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
MUC4Q99102 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.11□□□□□ -0.63
MUC4Q99102 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.11□□□□□ -0.63
MUC4Q99102 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.11□□□□□ -0.63
MUC4Q99102 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.11□□□□□ -0.63
MUC4Q99102 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 AC009477.1-201ENST00000452936 217 ntBASIC11.11□□□□□ -0.63
MUC4Q99102 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.11□□□□□ -0.63
MUC4Q99102 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.11□□□□□ -0.63
MUC4Q99102 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC11.11□□□□□ -0.63
MUC4Q99102 AC132938.2-201ENST00000579188 680 ntBASIC11.11□□□□□ -0.63
MUC4Q99102 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.11□□□□□ -0.63
MUC4Q99102 AL158211.3-201ENST00000607385 239 ntBASIC11.11□□□□□ -0.63
MUC4Q99102 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.11□□□□□ -0.63
MUC4Q99102 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 AL591163.1-201ENST00000641757 987 ntBASIC11.11□□□□□ -0.63
MUC4Q99102 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 AC012508.2-201ENST00000567613 1472 ntBASIC11.11□□□□□ -0.63
MUC4Q99102 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 AC092658.1-201ENST00000505836 891 ntBASIC11.11□□□□□ -0.63
MUC4Q99102 SERBP1P5-201ENST00000510079 1181 ntBASIC11.11□□□□□ -0.63
MUC4Q99102 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.11□□□□□ -0.63
MUC4Q99102 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
MUC4Q99102 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MUC4Q99102 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.1□□□□□ -0.63
MUC4Q99102 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
MUC4Q99102 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.1□□□□□ -0.63
MUC4Q99102 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.1□□□□□ -0.63
MUC4Q99102 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
MUC4Q99102 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms