Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 AC079178.1-201ENST00000420915 656 ntBASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 PFN1P12-201ENST00000455938 534 ntBASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 AC009542.2-202ENST00000619004 1067 ntBASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 REXO1L2P-201ENST00000425429 2069 ntBASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 ACTBP11-201ENST00000436287 1126 ntBASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 AC092658.1-201ENST00000505836 891 ntBASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 AL391280.1-201ENST00000506969 1062 ntBASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 AC004466.1-201ENST00000599515 1080 ntBASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 AL359258.3-201ENST00000622910 2331 ntBASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDK5RAP1Q96SZ6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.66■□□□□ 0.1
CDK5RAP1Q96SZ6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms