Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AL354718.3-201ENST00000616414 581 ntBASIC12.58□□□□□ -0.4
GAFA1Q96PS6 ENPP7P14-201ENST00000621765 1040 ntBASIC12.58□□□□□ -0.4
GAFA1Q96PS6 CR382287.1-201ENST00000623954 586 ntBASIC12.58□□□□□ -0.4
GAFA1Q96PS6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 CICP24-201ENST00000605464 2705 ntBASIC12.58□□□□□ -0.4
GAFA1Q96PS6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GAFA1Q96PS6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 KRT43P-201ENST00000434019 910 ntBASIC12.57□□□□□ -0.4
GAFA1Q96PS6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 RN7SL48P-201ENST00000579283 293 ntBASIC12.57□□□□□ -0.4
GAFA1Q96PS6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 AC244669.2-201ENST00000612320 853 ntBASIC12.57□□□□□ -0.4
GAFA1Q96PS6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 AC063926.2-201ENST00000623766 1308 ntBASIC12.57□□□□□ -0.4
GAFA1Q96PS6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
GAFA1Q96PS6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 AC016694.1-201ENST00000434179 700 ntBASIC12.56□□□□□ -0.4
GAFA1Q96PS6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms