Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.06■□□□□ 0.32
FGD4Q96M96 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 AC005740.2-201ENST00000511085 419 ntBASIC17.06■□□□□ 0.32
FGD4Q96M96 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.06■□□□□ 0.32
FGD4Q96M96 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
FGD4Q96M96 AC026740.1-201ENST00000607068 791 ntBASIC17.06■□□□□ 0.32
FGD4Q96M96 AL136301.1-201ENST00000615830 422 ntBASIC17.06■□□□□ 0.32
FGD4Q96M96 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 AC004899.1-201ENST00000424687 1714 ntBASIC17.06■□□□□ 0.32
FGD4Q96M96 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.06■□□□□ 0.32
FGD4Q96M96 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.06■□□□□ 0.32
FGD4Q96M96 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
FGD4Q96M96 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.06■□□□□ 0.32
FGD4Q96M96 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FGD4Q96M96 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.05■□□□□ 0.32
FGD4Q96M96 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.05■□□□□ 0.32
FGD4Q96M96 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
FGD4Q96M96 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.05■□□□□ 0.32
FGD4Q96M96 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.05■□□□□ 0.32
FGD4Q96M96 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.05■□□□□ 0.32
FGD4Q96M96 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FGD4Q96M96 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.05■□□□□ 0.32
FGD4Q96M96 AC021723.1-201ENST00000486306 515 ntBASIC17.05■□□□□ 0.32
FGD4Q96M96 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.05■□□□□ 0.32
FGD4Q96M96 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.05■□□□□ 0.32
FGD4Q96M96 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.05■□□□□ 0.32
FGD4Q96M96 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.05■□□□□ 0.32
FGD4Q96M96 AC004923.1-202ENST00000642106 209 ntBASIC17.05■□□□□ 0.32
FGD4Q96M96 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
FGD4Q96M96 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FGD4Q96M96 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.05■□□□□ 0.32
FGD4Q96M96 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.05■□□□□ 0.32
FGD4Q96M96 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.05■□□□□ 0.32
FGD4Q96M96 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FGD4Q96M96 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FGD4Q96M96 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.05■□□□□ 0.32
FGD4Q96M96 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FGD4Q96M96 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FGD4Q96M96 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.04■□□□□ 0.32
FGD4Q96M96 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.04■□□□□ 0.32
FGD4Q96M96 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FGD4Q96M96 AL138725.1-201ENST00000407347 1314 ntBASIC17.04■□□□□ 0.32
FGD4Q96M96 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.04■□□□□ 0.32
FGD4Q96M96 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.04■□□□□ 0.32
FGD4Q96M96 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.04■□□□□ 0.32
FGD4Q96M96 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.04■□□□□ 0.32
FGD4Q96M96 MIR769-201ENST00000390225 118 ntBASIC17.04■□□□□ 0.32
FGD4Q96M96 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.04■□□□□ 0.32
FGD4Q96M96 AC024681.1-201ENST00000521917 487 ntBASIC17.04■□□□□ 0.32
FGD4Q96M96 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.04■□□□□ 0.32
FGD4Q96M96 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.04■□□□□ 0.32
FGD4Q96M96 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.04■□□□□ 0.32
FGD4Q96M96 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.04■□□□□ 0.32
FGD4Q96M96 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.04■□□□□ 0.32
FGD4Q96M96 RN7SL190P-201ENST00000582519 257 ntBASIC17.04■□□□□ 0.32
FGD4Q96M96 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.04■□□□□ 0.32
FGD4Q96M96 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FGD4Q96M96 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.04■□□□□ 0.32
FGD4Q96M96 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.04■□□□□ 0.32
FGD4Q96M96 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.04■□□□□ 0.32
FGD4Q96M96 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 AC132872.4-202ENST00000622924 2756 ntBASIC17.04■□□□□ 0.32
FGD4Q96M96 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.04■□□□□ 0.32
FGD4Q96M96 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms