Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RPGRQ92834 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RPGRQ92834 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 FER1L4-210ENST00000615531 5998 ntBASIC18.48■□□□□ 0.55
RPGRQ92834 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 AC136759.1-202ENST00000530858 2194 ntBASIC18.48■□□□□ 0.55
RPGRQ92834 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RPGRQ92834 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.47■□□□□ 0.55
RPGRQ92834 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.47■□□□□ 0.55
RPGRQ92834 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.47■□□□□ 0.55
RPGRQ92834 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.47■□□□□ 0.55
RPGRQ92834 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RPGRQ92834 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.47■□□□□ 0.55
RPGRQ92834 AP005117.1-202ENST00000581724 1908 ntBASIC18.47■□□□□ 0.55
RPGRQ92834 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.47■□□□□ 0.55
RPGRQ92834 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RPGRQ92834 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.47■□□□□ 0.55
RPGRQ92834 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RPGRQ92834 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.47■□□□□ 0.55
RPGRQ92834 AC078875.1-201ENST00000431907 724 ntBASIC18.47■□□□□ 0.55
RPGRQ92834 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.47■□□□□ 0.55
RPGRQ92834 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.47■□□□□ 0.55
RPGRQ92834 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.47■□□□□ 0.55
RPGRQ92834 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
RPGRQ92834 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.47■□□□□ 0.55
RPGRQ92834 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
RPGRQ92834 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 AC092850.2-201ENST00000623821 2697 ntBASIC18.47■□□□□ 0.55
RPGRQ92834 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.47■□□□□ 0.55
RPGRQ92834 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.47■□□□□ 0.55
RPGRQ92834 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.47■□□□□ 0.55
RPGRQ92834 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.47■□□□□ 0.55
RPGRQ92834 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPGRQ92834 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RPGRQ92834 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.46■□□□□ 0.55
RPGRQ92834 AC098935.1-201ENST00000446057 611 ntBASIC18.46■□□□□ 0.55
RPGRQ92834 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.46■□□□□ 0.55
RPGRQ92834 RN7SL181P-201ENST00000462921 277 ntBASIC18.46■□□□□ 0.55
RPGRQ92834 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.46■□□□□ 0.55
RPGRQ92834 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.46■□□□□ 0.55
RPGRQ92834 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RPGRQ92834 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.46■□□□□ 0.55
RPGRQ92834 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.46■□□□□ 0.55
RPGRQ92834 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.46■□□□□ 0.55
RPGRQ92834 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.46■□□□□ 0.55
RPGRQ92834 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.46■□□□□ 0.55
RPGRQ92834 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPGRQ92834 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RPGRQ92834 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RPGRQ92834 KRT8P21-201ENST00000430398 1491 ntBASIC18.46■□□□□ 0.54
RPGRQ92834 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.46■□□□□ 0.54
RPGRQ92834 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPGRQ92834 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPGRQ92834 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.45■□□□□ 0.54
RPGRQ92834 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms