Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHROOM3Q8TF72 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.39■□□□□ 0.05
SHROOM3Q8TF72 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.39■□□□□ 0.05
SHROOM3Q8TF72 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHROOM3Q8TF72 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHROOM3Q8TF72 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SHROOM3Q8TF72 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHROOM3Q8TF72 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHROOM3Q8TF72 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SHROOM3Q8TF72 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.39■□□□□ 0.05
SHROOM3Q8TF72 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 ACTBP11-201ENST00000436287 1126 ntBASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 CNN2P10-201ENST00000443067 918 ntBASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 CSF2RBP1-201ENST00000447905 391 ntBASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 AL603764.1-201ENST00000636452 321 ntBASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 INE2-201ENST00000630399 1874 ntBASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 BX640514.1-201ENST00000583223 1918 ntBASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 AC007969.1-201ENST00000433675 447 ntBASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 AL022328.1-201ENST00000610050 478 ntBASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHROOM3Q8TF72 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 ENPP7P5-201ENST00000541031 1031 ntBASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 AC103810.3-201ENST00000583567 96 ntBASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 AC073413.1-201ENST00000603927 732 ntBASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 AL138725.1-201ENST00000407347 1314 ntBASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SHROOM3Q8TF72 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SHROOM3Q8TF72 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHROOM3Q8TF72 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SHROOM3Q8TF72 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms