Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC9.89□□□□□ -0.83
SMIM11BQ8TCY0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 INE2-201ENST00000630399 1874 ntBASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 EEF1DP4-201ENST00000446006 880 ntBASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AC108073.2-201ENST00000464002 357 ntBASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 FAM86EP-206ENST00000510506 987 ntBASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 CD7-202ENST00000578509 925 ntTSL 3 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 MIR497HG-202ENST00000572453 3838 ntBASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 CYP4F24P-201ENST00000586049 1580 ntBASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 AC118758.2-201ENST00000614242 2813 ntBASIC9.88□□□□□ -0.83
SMIM11BQ8TCY0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 AC020658.7-201ENST00000624274 2442 ntBASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC9.87□□□□□ -0.83
SMIM11BQ8TCY0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms