Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AC092933.1-201ENST00000393644 945 ntBASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AC007551.1-201ENST00000457394 519 ntBASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AC106760.1-201ENST00000508690 800 ntBASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 AP003680.1-201ENST00000598970 3660 ntBASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDND2Q8NHS1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 AC005912.2-201ENST00000619492 2400 ntBASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 REXO1L6P-201ENST00000603433 1515 ntBASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 RPL7P3-201ENST00000441388 714 ntBASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 FTH1P14-201ENST00000482930 551 ntBASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 AC092658.1-201ENST00000505836 891 ntBASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDND2Q8NHS1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms