Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.25■□□□□ 0.19
BEST2Q8NFU1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 MIR4538-201ENST00000581377 78 ntBASIC16.25■□□□□ 0.19
BEST2Q8NFU1 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 ZBED1P1-201ENST00000502364 1930 ntBASIC16.24■□□□□ 0.19
BEST2Q8NFU1 AC092384.3-202ENST00000564646 2873 ntBASIC16.24■□□□□ 0.19
BEST2Q8NFU1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 HOMER2P2-201ENST00000451621 847 ntBASIC16.24■□□□□ 0.19
BEST2Q8NFU1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 AL391280.1-201ENST00000506969 1062 ntBASIC16.24■□□□□ 0.19
BEST2Q8NFU1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 AC106820.3-201ENST00000561653 397 ntBASIC16.24■□□□□ 0.19
BEST2Q8NFU1 MIR4525-201ENST00000580000 75 ntBASIC16.24■□□□□ 0.19
BEST2Q8NFU1 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 AC009542.2-202ENST00000619004 1067 ntBASIC16.24■□□□□ 0.19
BEST2Q8NFU1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BEST2Q8NFU1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 MIR600HG-201ENST00000449175 5984 ntBASIC16.23■□□□□ 0.19
BEST2Q8NFU1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 FKBP4P6-201ENST00000457486 1332 ntBASIC16.23■□□□□ 0.19
BEST2Q8NFU1 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 AC103702.1-201ENST00000548801 2630 ntBASIC16.23■□□□□ 0.19
BEST2Q8NFU1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.23■□□□□ 0.19
BEST2Q8NFU1 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms