Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.37□□□□□ -0.59
NUP35Q8NFH5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
NUP35Q8NFH5 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 FOXO1B-201ENST00000504678 1527 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 ATP5G2P1-201ENST00000433580 426 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 RNA5SP410-201ENST00000516285 106 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AC105233.2-201ENST00000523697 349 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AF228730.5-201ENST00000530288 346 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 REXO1L6P-202ENST00000619970 1078 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 LILRP1-201ENST00000444199 1370 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AL731571.1-201ENST00000617058 5428 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AL139385.1-201ENST00000611744 3272 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AC114271.1-201ENST00000612689 2813 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 AGGF1P1-201ENST00000509500 2073 ntBASIC11.36□□□□□ -0.59
NUP35Q8NFH5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 TCAM1P-207ENST00000485295 1537 ntBASIC11.35□□□□□ -0.59
NUP35Q8NFH5 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
NUP35Q8NFH5 AC004241.5-201ENST00000623870 2448 ntBASIC11.35□□□□□ -0.59
NUP35Q8NFH5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms