Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC004945.1-201ENST00000416738 983 ntBASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 COX5BP1-201ENST00000507622 393 ntBASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.23□□□□□ -0.13
ARHGEF39Q8N4T4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 AC063926.3-201ENST00000624734 5658 ntBASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 AC009542.2-202ENST00000619004 1067 ntBASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 AC006058.4-201ENST00000624016 1670 ntBASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 AC020910.5-201ENST00000623668 1865 ntBASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 AC144831.1-201ENST00000573312 2656 ntBASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ARHGEF39Q8N4T4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 AC103702.1-201ENST00000548801 2630 ntBASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ARHGEF39Q8N4T4 AL136309.1-201ENST00000403917 691 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms