Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 AC092183.1-201ENST00000469884 875 ntBASIC14.04□□□□□ -0.16
VRK2Q86Y07 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 GPALPP1-207ENST00000611650 899 ntBASIC14.04□□□□□ -0.16
VRK2Q86Y07 MIR8072-201ENST00000614241 80 ntBASIC14.04□□□□□ -0.16
VRK2Q86Y07 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 AC007326.2-201ENST00000624224 7579 ntBASIC14.04□□□□□ -0.16
VRK2Q86Y07 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.04□□□□□ -0.16
VRK2Q86Y07 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VRK2Q86Y07 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PMS2P2-201ENST00000425039 1128 ntBASIC14.03□□□□□ -0.16
VRK2Q86Y07 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 AP001267.2-201ENST00000532619 2086 ntBASIC14.03□□□□□ -0.16
VRK2Q86Y07 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VRK2Q86Y07 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VRK2Q86Y07 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.02□□□□□ -0.16
VRK2Q86Y07 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK2Q86Y07 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK2Q86Y07 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK2Q86Y07 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
VRK2Q86Y07 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK2Q86Y07 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.02□□□□□ -0.16
VRK2Q86Y07 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
VRK2Q86Y07 AC023090.2-201ENST00000625182 2110 ntBASIC14.02□□□□□ -0.16
VRK2Q86Y07 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
VRK2Q86Y07 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VRK2Q86Y07 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.02□□□□□ -0.16
VRK2Q86Y07 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK2Q86Y07 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms