Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RPL13AP19-201ENST00000434320 584 ntBASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 XBP1P1-201ENST00000436573 652 ntBASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 AC131206.1-201ENST00000538078 1211 ntBASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 AC093752.3-201ENST00000567343 901 ntBASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.05■□□□□ 0.16
CNKSR3Q6P9H4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 AP005117.1-202ENST00000581724 1908 ntBASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 CHCHD2P9-201ENST00000461726 456 ntBASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNKSR3Q6P9H4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 AC023090.2-201ENST00000625182 2110 ntBASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 MIR557-201ENST00000385239 98 ntBASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 IGHV3-37-201ENST00000518544 340 ntBASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 RPL17P45-201ENST00000586289 509 ntBASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNKSR3Q6P9H4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms