Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
ZNF549Q6P9A3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ZNF549Q6P9A3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.05■□□□□ 0
ZNF549Q6P9A3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
ZNF549Q6P9A3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.05■□□□□ 0
ZNF549Q6P9A3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.05■□□□□ 0
ZNF549Q6P9A3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ZNF549Q6P9A3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.05■□□□□ 0
ZNF549Q6P9A3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
ZNF549Q6P9A3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.05■□□□□ 0
ZNF549Q6P9A3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.05■□□□□ 0
ZNF549Q6P9A3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ZNF549Q6P9A3 SNX18-202ENST00000343017 3140 ntBASIC15.05■□□□□ -0
ZNF549Q6P9A3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 C1QBPP1-201ENST00000400117 770 ntBASIC15.05■□□□□ -0
ZNF549Q6P9A3 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.05■□□□□ -0
ZNF549Q6P9A3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 AC008761.3-201ENST00000624803 892 ntBASIC15.05■□□□□ -0
ZNF549Q6P9A3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
ZNF549Q6P9A3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ZNF549Q6P9A3 AC026748.1-201ENST00000624349 3251 ntBASIC15.05■□□□□ -0
ZNF549Q6P9A3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 FAM207CP-201ENST00000443486 507 ntBASIC15.04■□□□□ -0
ZNF549Q6P9A3 MYCLP2-201ENST00000449268 967 ntBASIC15.04■□□□□ -0
ZNF549Q6P9A3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 ELK1P1-201ENST00000485699 580 ntBASIC15.04■□□□□ -0
ZNF549Q6P9A3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 TMEM261P1-201ENST00000604899 340 ntBASIC15.04■□□□□ -0
ZNF549Q6P9A3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.04■□□□□ -0
ZNF549Q6P9A3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.04■□□□□ -0
ZNF549Q6P9A3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF549Q6P9A3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
ZNF549Q6P9A3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF549Q6P9A3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF549Q6P9A3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.03■□□□□ -0
ZNF549Q6P9A3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF549Q6P9A3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF549Q6P9A3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.03■□□□□ -0
ZNF549Q6P9A3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF549Q6P9A3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF549Q6P9A3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF549Q6P9A3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF549Q6P9A3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF549Q6P9A3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
ZNF549Q6P9A3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.03■□□□□ -0
ZNF549Q6P9A3 AL391825.1-201ENST00000457671 1364 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms