Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.93■□□□□ 0.14
RNF43Q68DV7 AP001063.1-201ENST00000568332 529 ntBASIC15.93■□□□□ 0.14
RNF43Q68DV7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 AL645728.2-202ENST00000641679 227 ntBASIC15.93■□□□□ 0.14
RNF43Q68DV7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.93■□□□□ 0.14
RNF43Q68DV7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF43Q68DV7 AC093525.8-201ENST00000624099 1342 ntBASIC15.93■□□□□ 0.14
RNF43Q68DV7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AC068587.6-202ENST00000641839 5619 ntBASIC15.92■□□□□ 0.14
RNF43Q68DV7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 FAM21FP-201ENST00000426241 1131 ntBASIC15.92■□□□□ 0.14
RNF43Q68DV7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AC126365.1-201ENST00000578585 1514 ntBASIC15.92■□□□□ 0.14
RNF43Q68DV7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AJ011931.1-201ENST00000618749 2492 ntBASIC15.92■□□□□ 0.14
RNF43Q68DV7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF43Q68DV7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF43Q68DV7 AC127383.1-201ENST00000444697 1800 ntBASIC15.91■□□□□ 0.14
RNF43Q68DV7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 AC041040.2-201ENST00000622926 2899 ntBASIC15.91■□□□□ 0.14
RNF43Q68DV7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms