Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC4Q5GLZ8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC4Q5GLZ8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.97■□□□□ 0.31
HERC4Q5GLZ8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC4Q5GLZ8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC4Q5GLZ8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERC4Q5GLZ8 AL157414.3-201ENST00000624276 1954 ntBASIC16.97■□□□□ 0.31
HERC4Q5GLZ8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
HERC4Q5GLZ8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 AL360270.3-201ENST00000609118 1348 ntBASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 GOLGA2P4-201ENST00000441462 777 ntBASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 AC124283.3-201ENST00000570869 594 ntBASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 AL033527.5-201ENST00000641382 801 ntBASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HERC4Q5GLZ8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HERC4Q5GLZ8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
HERC4Q5GLZ8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HERC4Q5GLZ8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.96■□□□□ 0.3
HERC4Q5GLZ8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HERC4Q5GLZ8 KRT8P22-201ENST00000562317 1415 ntBASIC16.96■□□□□ 0.3
HERC4Q5GLZ8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
HERC4Q5GLZ8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 REXO1L5P-201ENST00000622260 2098 ntBASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 SOCS2P1-201ENST00000417727 557 ntBASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 AC099548.2-209ENST00000480264 625 ntBASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 RNA5SP412-201ENST00000516234 123 ntBASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 BX539320.1-201ENST00000623759 877 ntBASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC4Q5GLZ8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms