Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
USH1GQ495M9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.34■□□□□ 0.37
USH1GQ495M9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
USH1GQ495M9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USH1GQ495M9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USH1GQ495M9 AL596257.1-201ENST00000641463 2694 ntBASIC17.34■□□□□ 0.37
USH1GQ495M9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USH1GQ495M9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
USH1GQ495M9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.37
USH1GQ495M9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.33■□□□□ 0.37
USH1GQ495M9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
USH1GQ495M9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USH1GQ495M9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.33■□□□□ 0.37
USH1GQ495M9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
USH1GQ495M9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USH1GQ495M9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.33■□□□□ 0.37
USH1GQ495M9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
USH1GQ495M9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.33■□□□□ 0.36
USH1GQ495M9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
USH1GQ495M9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.33■□□□□ 0.36
USH1GQ495M9 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.33■□□□□ 0.36
USH1GQ495M9 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.33■□□□□ 0.36
USH1GQ495M9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.33■□□□□ 0.36
USH1GQ495M9 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.33■□□□□ 0.36
USH1GQ495M9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.33■□□□□ 0.36
USH1GQ495M9 AC104306.2-201ENST00000451877 341 ntBASIC17.33■□□□□ 0.36
USH1GQ495M9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.33■□□□□ 0.36
USH1GQ495M9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
USH1GQ495M9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
USH1GQ495M9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.33■□□□□ 0.36
USH1GQ495M9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.33■□□□□ 0.36
USH1GQ495M9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.33■□□□□ 0.36
USH1GQ495M9 AL096828.3-201ENST00000615354 462 ntBASIC17.33■□□□□ 0.36
USH1GQ495M9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
USH1GQ495M9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
USH1GQ495M9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
USH1GQ495M9 AC020910.5-201ENST00000623668 1865 ntBASIC17.33■□□□□ 0.36
USH1GQ495M9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
USH1GQ495M9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 AL109954.1-202ENST00000564051 2148 ntBASIC17.32■□□□□ 0.36
USH1GQ495M9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 HIST2H2BB-201ENST00000449108 381 ntBASIC17.32■□□□□ 0.36
USH1GQ495M9 AL591846.1-201ENST00000451736 433 ntBASIC17.32■□□□□ 0.36
USH1GQ495M9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.32■□□□□ 0.36
USH1GQ495M9 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.32■□□□□ 0.36
USH1GQ495M9 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.32■□□□□ 0.36
USH1GQ495M9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.32■□□□□ 0.36
USH1GQ495M9 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.32■□□□□ 0.36
USH1GQ495M9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.32■□□□□ 0.36
USH1GQ495M9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
USH1GQ495M9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
USH1GQ495M9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.32■□□□□ 0.36
USH1GQ495M9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USH1GQ495M9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms