Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 SNORD3B-2-202ENST00000571722 791 ntBASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 AC005962.1-201ENST00000584100 773 ntBASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 Z98259.2-201ENST00000641583 609 ntBASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 TMBIM7P-203ENST00000641617 1718 ntBASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SHROOM1Q2M3G4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 MARK2P5-201ENST00000507649 634 ntBASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 SCARNA21-201ENST00000517026 139 ntBASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 RN7SL163P-201ENST00000583100 276 ntBASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 CU633904.3-201ENST00000624042 1029 ntBASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 AC105917.1-201ENST00000506637 2539 ntBASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM1Q2M3G4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 AC013268.4-201ENST00000637413 2228 ntBASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 AC073347.1-201ENST00000421633 2643 ntBASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 ELK2AP-201ENST00000392510 1007 ntBASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 TUBB8P8-201ENST00000458717 1058 ntBASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 HLA-J-204ENST00000495278 958 ntBASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 AC106794.1-201ENST00000506935 792 ntBASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 AC103988.2-201ENST00000561804 725 ntBASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
SHROOM1Q2M3G4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms