Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.32■□□□□ 0.52
SCN7AQ01118 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SCN7AQ01118 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SCN7AQ01118 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 RN7SKP109-201ENST00000410592 316 ntBASIC18.31■□□□□ 0.52
SCN7AQ01118 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 GUSBP10-201ENST00000417412 665 ntBASIC18.31■□□□□ 0.52
SCN7AQ01118 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 AC004837.1-201ENST00000446267 564 ntBASIC18.31■□□□□ 0.52
SCN7AQ01118 AC005357.2-202ENST00000590507 1060 ntBASIC18.31■□□□□ 0.52
SCN7AQ01118 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.31■□□□□ 0.52
SCN7AQ01118 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.31■□□□□ 0.52
SCN7AQ01118 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 ACE3P-201ENST00000423435 1973 ntBASIC18.31■□□□□ 0.52
SCN7AQ01118 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.31■□□□□ 0.52
SCN7AQ01118 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SCN7AQ01118 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 OR8T1P-201ENST00000421347 918 ntBASIC18.31■□□□□ 0.52
SCN7AQ01118 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC18.31■□□□□ 0.52
SCN7AQ01118 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.31■□□□□ 0.52
SCN7AQ01118 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.31■□□□□ 0.52
SCN7AQ01118 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
SCN7AQ01118 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.31■□□□□ 0.52
SCN7AQ01118 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.31■□□□□ 0.52
SCN7AQ01118 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN7AQ01118 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
SCN7AQ01118 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SCN7AQ01118 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN7AQ01118 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCN7AQ01118 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SCN7AQ01118 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN7AQ01118 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN7AQ01118 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN7AQ01118 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.3■□□□□ 0.52
SCN7AQ01118 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN7AQ01118 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN7AQ01118 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SCN7AQ01118 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.3■□□□□ 0.52
SCN7AQ01118 AL139008.1-201ENST00000437894 228 ntBASIC18.3■□□□□ 0.52
SCN7AQ01118 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.3■□□□□ 0.52
SCN7AQ01118 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.3■□□□□ 0.52
SCN7AQ01118 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.3■□□□□ 0.52
SCN7AQ01118 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN7AQ01118 MIR3180-2-201ENST00000581748 88 ntBASIC18.3■□□□□ 0.52
SCN7AQ01118 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18.3■□□□□ 0.52
SCN7AQ01118 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.3■□□□□ 0.52
SCN7AQ01118 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCN7AQ01118 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN7AQ01118 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN7AQ01118 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SCN7AQ01118 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN7AQ01118 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SCN7AQ01118 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN7AQ01118 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN7AQ01118 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SCN7AQ01118 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SCN7AQ01118 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
SCN7AQ01118 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN7AQ01118 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN7AQ01118 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN7AQ01118 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.29■□□□□ 0.52
SCN7AQ01118 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SCN7AQ01118 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN7AQ01118 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN7AQ01118 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.29■□□□□ 0.52
SCN7AQ01118 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN7AQ01118 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN7AQ01118 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.29■□□□□ 0.52
SCN7AQ01118 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN7AQ01118 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN7AQ01118 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN7AQ01118 ERP29P1-201ENST00000442902 706 ntBASIC18.29■□□□□ 0.52
SCN7AQ01118 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms