Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.43□□□□□ -0.42
SPCS3P61009 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.43□□□□□ -0.42
SPCS3P61009 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SPCS3P61009 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.43□□□□□ -0.42
SPCS3P61009 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.43□□□□□ -0.42
SPCS3P61009 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.43□□□□□ -0.42
SPCS3P61009 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.43□□□□□ -0.42
SPCS3P61009 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.43□□□□□ -0.42
SPCS3P61009 ALG1L8P-201ENST00000533887 760 ntBASIC12.43□□□□□ -0.42
SPCS3P61009 AC040169.1-201ENST00000565382 521 ntBASIC12.43□□□□□ -0.42
SPCS3P61009 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.43□□□□□ -0.42
SPCS3P61009 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.43□□□□□ -0.42
SPCS3P61009 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.43□□□□□ -0.42
SPCS3P61009 AL645728.2-202ENST00000641679 227 ntBASIC12.43□□□□□ -0.42
SPCS3P61009 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SPCS3P61009 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SPCS3P61009 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SPCS3P61009 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 AP001972.5-201ENST00000624624 2338 ntBASIC12.43□□□□□ -0.42
SPCS3P61009 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.43□□□□□ -0.42
SPCS3P61009 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.43□□□□□ -0.42
SPCS3P61009 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.43□□□□□ -0.42
SPCS3P61009 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPCS3P61009 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SPCS3P61009 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.42□□□□□ -0.42
SPCS3P61009 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.42□□□□□ -0.42
SPCS3P61009 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 MKNK2P1-201ENST00000437526 628 ntBASIC12.42□□□□□ -0.42
SPCS3P61009 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.42□□□□□ -0.42
SPCS3P61009 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.42□□□□□ -0.42
SPCS3P61009 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.42□□□□□ -0.42
SPCS3P61009 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
SPCS3P61009 SLED1-202ENST00000512051 380 ntBASIC12.42□□□□□ -0.42
SPCS3P61009 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.42□□□□□ -0.42
SPCS3P61009 AC015910.1-201ENST00000579400 975 ntBASIC12.42□□□□□ -0.42
SPCS3P61009 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SPCS3P61009 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms