Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.66■□□□□ 0.42
RHBDL3P58872 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 Z97180.1-201ENST00000445173 988 ntBASIC17.66■□□□□ 0.42
RHBDL3P58872 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.66■□□□□ 0.42
RHBDL3P58872 RCC2P8-201ENST00000502779 1035 ntBASIC17.66■□□□□ 0.42
RHBDL3P58872 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.66■□□□□ 0.42
RHBDL3P58872 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.66■□□□□ 0.42
RHBDL3P58872 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 FGFR3P5-201ENST00000564496 886 ntBASIC17.66■□□□□ 0.42
RHBDL3P58872 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.66■□□□□ 0.42
RHBDL3P58872 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.66■□□□□ 0.42
RHBDL3P58872 AC079336.7-201ENST00000623428 1078 ntBASIC17.66■□□□□ 0.42
RHBDL3P58872 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.66■□□□□ 0.42
RHBDL3P58872 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RHBDL3P58872 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RHBDL3P58872 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RHBDL3P58872 CICP23-201ENST00000605013 2741 ntBASIC17.66■□□□□ 0.42
RHBDL3P58872 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.66■□□□□ 0.42
RHBDL3P58872 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
RHBDL3P58872 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDL3P58872 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RHBDL3P58872 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.65■□□□□ 0.42
RHBDL3P58872 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.65■□□□□ 0.42
RHBDL3P58872 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
RHBDL3P58872 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.65■□□□□ 0.42
RHBDL3P58872 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RHBDL3P58872 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RHBDL3P58872 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.65■□□□□ 0.42
RHBDL3P58872 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.65■□□□□ 0.42
RHBDL3P58872 AL133466.1-201ENST00000447582 150 ntBASIC17.65■□□□□ 0.42
RHBDL3P58872 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.65■□□□□ 0.42
RHBDL3P58872 AC103988.2-201ENST00000561804 725 ntBASIC17.65■□□□□ 0.42
RHBDL3P58872 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.65■□□□□ 0.42
RHBDL3P58872 AC009884.2-201ENST00000603110 324 ntBASIC17.65■□□□□ 0.42
RHBDL3P58872 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.65■□□□□ 0.42
RHBDL3P58872 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.65■□□□□ 0.42
RHBDL3P58872 CYP4F23P-201ENST00000593402 1579 ntBASIC17.65■□□□□ 0.42
RHBDL3P58872 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RHBDL3P58872 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 AC073347.1-201ENST00000421633 2643 ntBASIC17.65■□□□□ 0.42
RHBDL3P58872 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDL3P58872 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.64■□□□□ 0.42
RHBDL3P58872 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
RHBDL3P58872 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RHBDL3P58872 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDL3P58872 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDL3P58872 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.64■□□□□ 0.41
RHBDL3P58872 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDL3P58872 ISCA2P1-201ENST00000425548 448 ntBASIC17.64■□□□□ 0.41
RHBDL3P58872 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.64■□□□□ 0.41
RHBDL3P58872 AC134698.3-201ENST00000523880 214 ntBASIC17.64■□□□□ 0.41
RHBDL3P58872 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.64■□□□□ 0.41
RHBDL3P58872 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RHBDL3P58872 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDL3P58872 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDL3P58872 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.64■□□□□ 0.41
RHBDL3P58872 AL133499.1-201ENST00000596207 608 ntBASIC17.64■□□□□ 0.41
RHBDL3P58872 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDL3P58872 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.64■□□□□ 0.41
RHBDL3P58872 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RHBDL3P58872 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
RHBDL3P58872 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDL3P58872 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RHBDL3P58872 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms