Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 AC097359.3-201ENST00000603982 1210 ntBASIC14.73□□□□□ -0.05
ERFP50548 FAM215A-202ENST00000632077 792 ntBASIC14.73□□□□□ -0.05
ERFP50548 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.73□□□□□ -0.05
ERFP50548 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERFP50548 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERFP50548 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERFP50548 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERFP50548 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ERFP50548 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERFP50548 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERFP50548 AC015802.1-201ENST00000588104 1449 ntBASIC14.73□□□□□ -0.05
ERFP50548 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.73□□□□□ -0.05
ERFP50548 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.73□□□□□ -0.05
ERFP50548 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERFP50548 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.73□□□□□ -0.05
ERFP50548 AC118758.2-201ENST00000614242 2813 ntBASIC14.73□□□□□ -0.05
ERFP50548 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERFP50548 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ERFP50548 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERFP50548 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERFP50548 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.72□□□□□ -0.05
ERFP50548 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.72□□□□□ -0.05
ERFP50548 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
ERFP50548 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.72□□□□□ -0.05
ERFP50548 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
ERFP50548 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
ERFP50548 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 AC004987.2-201ENST00000395959 1148 ntBASIC14.72□□□□□ -0.05
ERFP50548 RNA5SP419-201ENST00000515908 135 ntBASIC14.72□□□□□ -0.05
ERFP50548 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.72□□□□□ -0.05
ERFP50548 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.72□□□□□ -0.05
ERFP50548 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.72□□□□□ -0.05
ERFP50548 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.72□□□□□ -0.05
ERFP50548 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.72□□□□□ -0.05
ERFP50548 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ERFP50548 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
ERFP50548 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 KRT8P37-201ENST00000451609 1420 ntBASIC14.72□□□□□ -0.05
ERFP50548 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ERFP50548 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ERFP50548 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ERFP50548 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.72□□□□□ -0.05
ERFP50548 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERFP50548 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.71□□□□□ -0.05
ERFP50548 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 AC083964.2-201ENST00000623988 2396 ntBASIC14.71□□□□□ -0.05
ERFP50548 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
ERFP50548 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ERFP50548 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ERFP50548 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ERFP50548 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ERFP50548 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.71□□□□□ -0.05
ERFP50548 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.71□□□□□ -0.05
ERFP50548 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ERFP50548 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ERFP50548 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ERFP50548 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.71□□□□□ -0.05
ERFP50548 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.71□□□□□ -0.05
ERFP50548 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.71□□□□□ -0.05
ERFP50548 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.71□□□□□ -0.05
ERFP50548 AL031284.1-201ENST00000419297 478 ntBASIC14.71□□□□□ -0.05
ERFP50548 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.71□□□□□ -0.05
ERFP50548 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.71□□□□□ -0.05
ERFP50548 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.71□□□□□ -0.05
ERFP50548 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.71□□□□□ -0.05
ERFP50548 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.71□□□□□ -0.05
ERFP50548 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.71□□□□□ -0.05
ERFP50548 AL138918.1-201ENST00000568306 659 ntBASIC14.71□□□□□ -0.05
ERFP50548 AC008735.5-201ENST00000623544 497 ntBASIC14.71□□□□□ -0.05
ERFP50548 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
ERFP50548 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.71□□□□□ -0.05
ERFP50548 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.71□□□□□ -0.05
ERFP50548 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERFP50548 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms