Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC9.7□□□□□ -0.86
UBE2AP49459 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC9.7□□□□□ -0.86
UBE2AP49459 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
UBE2AP49459 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC9.7□□□□□ -0.86
UBE2AP49459 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC9.7□□□□□ -0.86
UBE2AP49459 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC9.7□□□□□ -0.86
UBE2AP49459 AL691403.2-201ENST00000618460 490 ntBASIC9.7□□□□□ -0.86
UBE2AP49459 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
UBE2AP49459 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
UBE2AP49459 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC9.7□□□□□ -0.86
UBE2AP49459 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC9.7□□□□□ -0.86
UBE2AP49459 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC9.7□□□□□ -0.86
UBE2AP49459 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
UBE2AP49459 GRK6P1-201ENST00000400595 1711 ntBASIC9.7□□□□□ -0.86
UBE2AP49459 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
UBE2AP49459 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
UBE2AP49459 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
UBE2AP49459 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
UBE2AP49459 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
UBE2AP49459 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC9.7□□□□□ -0.86
UBE2AP49459 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
UBE2AP49459 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC9.7□□□□□ -0.86
UBE2AP49459 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBE2AP49459 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
UBE2AP49459 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
UBE2AP49459 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC9.69□□□□□ -0.86
UBE2AP49459 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 SPDYE17-201ENST00000412399 783 ntBASIC9.69□□□□□ -0.86
UBE2AP49459 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 GPS2P2-201ENST00000430745 888 ntBASIC9.69□□□□□ -0.86
UBE2AP49459 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 FAM86GP-201ENST00000448322 971 ntBASIC9.69□□□□□ -0.86
UBE2AP49459 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 NME4-207ENST00000450036 985 ntTSL 3 BASIC9.69□□□□□ -0.86
UBE2AP49459 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 AL023775.1-201ENST00000454907 1746 ntBASIC9.69□□□□□ -0.86
UBE2AP49459 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 AC067863.1-201ENST00000494933 530 ntBASIC9.69□□□□□ -0.86
UBE2AP49459 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 SLED1-202ENST00000512051 380 ntBASIC9.69□□□□□ -0.86
UBE2AP49459 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 AC069262.1-201ENST00000539058 672 ntBASIC9.69□□□□□ -0.86
UBE2AP49459 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 VPS29-207ENST00000549970 818 ntTSL 3 BASIC9.69□□□□□ -0.86
UBE2AP49459 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
UBE2AP49459 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC9.69□□□□□ -0.86
UBE2AP49459 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
UBE2AP49459 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
UBE2AP49459 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
UBE2AP49459 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms