Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.38□□□□□ -0.27
CX3CR1P49238 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.38□□□□□ -0.27
CX3CR1P49238 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.38□□□□□ -0.27
CX3CR1P49238 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.38□□□□□ -0.27
CX3CR1P49238 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.38□□□□□ -0.27
CX3CR1P49238 SRD5A3P1-201ENST00000603021 949 ntBASIC13.38□□□□□ -0.27
CX3CR1P49238 AC008738.7-201ENST00000609744 511 ntBASIC13.38□□□□□ -0.27
CX3CR1P49238 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CX3CR1P49238 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CX3CR1P49238 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CX3CR1P49238 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CX3CR1P49238 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CX3CR1P49238 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.38□□□□□ -0.27
CX3CR1P49238 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CX3CR1P49238 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CX3CR1P49238 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CX3CR1P49238 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CX3CR1P49238 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CX3CR1P49238 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CX3CR1P49238 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.38□□□□□ -0.27
CX3CR1P49238 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.38□□□□□ -0.27
CX3CR1P49238 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CX3CR1P49238 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.38□□□□□ -0.27
CX3CR1P49238 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CX3CR1P49238 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 CLK3P2-201ENST00000427566 1453 ntBASIC13.37□□□□□ -0.27
CX3CR1P49238 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.37□□□□□ -0.27
CX3CR1P49238 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.37□□□□□ -0.27
CX3CR1P49238 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 AC036164.1-201ENST00000570544 333 ntBASIC13.37□□□□□ -0.27
CX3CR1P49238 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 AC106028.4-201ENST00000614509 607 ntBASIC13.37□□□□□ -0.27
CX3CR1P49238 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 AC004840.1-201ENST00000636359 365 ntBASIC13.37□□□□□ -0.27
CX3CR1P49238 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CR1P49238 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.37□□□□□ -0.27
CX3CR1P49238 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.37□□□□□ -0.27
CX3CR1P49238 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CX3CR1P49238 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CR1P49238 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CR1P49238 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CX3CR1P49238 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CR1P49238 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CR1P49238 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CR1P49238 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
CX3CR1P49238 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CX3CR1P49238 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.36□□□□□ -0.27
CX3CR1P49238 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CR1P49238 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CR1P49238 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CR1P49238 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CX3CR1P49238 LILRP1-201ENST00000444199 1370 ntBASIC13.36□□□□□ -0.27
CX3CR1P49238 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms