Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TNNI2P48788 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TNNI2P48788 SHC1P1-201ENST00000425230 1745 ntBASIC17.89■□□□□ 0.46
TNNI2P48788 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TNNI2P48788 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.89■□□□□ 0.46
TNNI2P48788 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TNNI2P48788 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TNNI2P48788 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.89■□□□□ 0.45
TNNI2P48788 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 ACTG1P2-201ENST00000415776 1125 ntBASIC17.89■□□□□ 0.45
TNNI2P48788 ACTG1P11-201ENST00000425411 1125 ntBASIC17.89■□□□□ 0.45
TNNI2P48788 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.89■□□□□ 0.45
TNNI2P48788 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.89■□□□□ 0.45
TNNI2P48788 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.89■□□□□ 0.45
TNNI2P48788 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.89■□□□□ 0.45
TNNI2P48788 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 RN7SL574P-201ENST00000581512 297 ntBASIC17.89■□□□□ 0.45
TNNI2P48788 MIR4706-201ENST00000582134 82 ntBASIC17.89■□□□□ 0.45
TNNI2P48788 AC090164.2-201ENST00000611487 516 ntBASIC17.89■□□□□ 0.45
TNNI2P48788 AC068587.8-201ENST00000641239 219 ntBASIC17.89■□□□□ 0.45
TNNI2P48788 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TNNI2P48788 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
TNNI2P48788 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.89■□□□□ 0.45
TNNI2P48788 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TNNI2P48788 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.89■□□□□ 0.45
TNNI2P48788 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TNNI2P48788 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNNI2P48788 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.88■□□□□ 0.45
TNNI2P48788 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TNNI2P48788 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.88■□□□□ 0.45
TNNI2P48788 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
TNNI2P48788 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.88■□□□□ 0.45
TNNI2P48788 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 AL157414.3-201ENST00000624276 1954 ntBASIC17.88■□□□□ 0.45
TNNI2P48788 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.88■□□□□ 0.45
TNNI2P48788 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 AL157791.1-201ENST00000553667 1699 ntBASIC17.88■□□□□ 0.45
TNNI2P48788 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.88■□□□□ 0.45
TNNI2P48788 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.88■□□□□ 0.45
TNNI2P48788 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TNNI2P48788 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TNNI2P48788 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.88■□□□□ 0.45
TNNI2P48788 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 AC006335.1-201ENST00000445200 547 ntBASIC17.88■□□□□ 0.45
TNNI2P48788 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.88■□□□□ 0.45
TNNI2P48788 AC125604.1-201ENST00000496255 707 ntBASIC17.88■□□□□ 0.45
TNNI2P48788 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.88■□□□□ 0.45
TNNI2P48788 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TNNI2P48788 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.88■□□□□ 0.45
TNNI2P48788 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.88■□□□□ 0.45
TNNI2P48788 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
TNNI2P48788 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TNNI2P48788 AC009955.4-201ENST00000597192 544 ntBASIC17.88■□□□□ 0.45
TNNI2P48788 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.88■□□□□ 0.45
TNNI2P48788 AC079336.7-201ENST00000623428 1078 ntBASIC17.88■□□□□ 0.45
TNNI2P48788 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNNI2P48788 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.88■□□□□ 0.45
TNNI2P48788 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.88■□□□□ 0.45
TNNI2P48788 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TNNI2P48788 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNNI2P48788 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNNI2P48788 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.87■□□□□ 0.45
TNNI2P48788 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNNI2P48788 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNNI2P48788 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TNNI2P48788 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
TNNI2P48788 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNNI2P48788 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNNI2P48788 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms