Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CBX5P45973 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CBX5P45973 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.16□□□□□ -0.3
CBX5P45973 AC007614.4-201ENST00000564048 1827 ntBASIC13.16□□□□□ -0.3
CBX5P45973 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.15□□□□□ -0.3
CBX5P45973 BX640514.1-201ENST00000583223 1918 ntBASIC13.15□□□□□ -0.3
CBX5P45973 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CBX5P45973 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CBX5P45973 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.15□□□□□ -0.3
CBX5P45973 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 AC142381.1-201ENST00000426099 345 ntBASIC13.15□□□□□ -0.3
CBX5P45973 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.15□□□□□ -0.3
CBX5P45973 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.15□□□□□ -0.3
CBX5P45973 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.15□□□□□ -0.3
CBX5P45973 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.15□□□□□ -0.3
CBX5P45973 AP002472.1-201ENST00000577490 586 ntBASIC13.15□□□□□ -0.3
CBX5P45973 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.15□□□□□ -0.3
CBX5P45973 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.15□□□□□ -0.3
CBX5P45973 INTS4P1-203ENST00000641008 3683 ntBASIC13.15□□□□□ -0.3
CBX5P45973 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CBX5P45973 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CBX5P45973 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.15□□□□□ -0.31
CBX5P45973 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
CBX5P45973 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CBX5P45973 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CBX5P45973 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 AC015909.5-201ENST00000624336 2266 ntBASIC13.14□□□□□ -0.31
CBX5P45973 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.14□□□□□ -0.31
CBX5P45973 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CBX5P45973 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.14□□□□□ -0.31
CBX5P45973 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 UNC93B7-201ENST00000509439 705 ntBASIC13.14□□□□□ -0.31
CBX5P45973 FAM86C2P-203ENST00000528684 1004 ntBASIC13.14□□□□□ -0.31
CBX5P45973 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.14□□□□□ -0.31
CBX5P45973 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.14□□□□□ -0.31
CBX5P45973 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.14□□□□□ -0.31
CBX5P45973 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.14□□□□□ -0.31
CBX5P45973 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms