Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.24■□□□□ 0.35
COPB2P35606 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 ELK2AP-201ENST00000392510 1007 ntBASIC17.24■□□□□ 0.35
COPB2P35606 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.24■□□□□ 0.35
COPB2P35606 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.24■□□□□ 0.35
COPB2P35606 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.24■□□□□ 0.35
COPB2P35606 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 AL133466.1-201ENST00000447582 150 ntBASIC17.24■□□□□ 0.35
COPB2P35606 RN7SL769P-201ENST00000469386 295 ntBASIC17.24■□□□□ 0.35
COPB2P35606 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.24■□□□□ 0.35
COPB2P35606 AC022217.1-201ENST00000521069 738 ntBASIC17.24■□□□□ 0.35
COPB2P35606 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.24■□□□□ 0.35
COPB2P35606 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.24■□□□□ 0.35
COPB2P35606 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.24■□□□□ 0.35
COPB2P35606 AL358472.3-201ENST00000608147 415 ntBASIC17.24■□□□□ 0.35
COPB2P35606 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.24■□□□□ 0.35
COPB2P35606 AL136295.7-201ENST00000619226 1200 ntBASIC17.24■□□□□ 0.35
COPB2P35606 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.24■□□□□ 0.35
COPB2P35606 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.24■□□□□ 0.35
COPB2P35606 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.24■□□□□ 0.35
COPB2P35606 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
COPB2P35606 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
COPB2P35606 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.23■□□□□ 0.35
COPB2P35606 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.23■□□□□ 0.35
COPB2P35606 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.23■□□□□ 0.35
COPB2P35606 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.23■□□□□ 0.35
COPB2P35606 CYP46A4P-201ENST00000414953 267 ntBASIC17.23■□□□□ 0.35
COPB2P35606 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.23■□□□□ 0.35
COPB2P35606 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
COPB2P35606 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.23■□□□□ 0.35
COPB2P35606 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
COPB2P35606 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.23■□□□□ 0.35
COPB2P35606 RN7SL190P-201ENST00000582519 257 ntBASIC17.23■□□□□ 0.35
COPB2P35606 AC008825.2-201ENST00000603374 718 ntBASIC17.23■□□□□ 0.35
COPB2P35606 AL645939.5-201ENST00000606834 243 ntBASIC17.23■□□□□ 0.35
COPB2P35606 AC091544.8-201ENST00000619490 361 ntBASIC17.23■□□□□ 0.35
COPB2P35606 AL162426.1-201ENST00000624141 743 ntBASIC17.23■□□□□ 0.35
COPB2P35606 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
COPB2P35606 AC004923.1-202ENST00000642106 209 ntBASIC17.23■□□□□ 0.35
COPB2P35606 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.23■□□□□ 0.35
COPB2P35606 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
COPB2P35606 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COPB2P35606 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COPB2P35606 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.22■□□□□ 0.35
COPB2P35606 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.22■□□□□ 0.35
COPB2P35606 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COPB2P35606 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
COPB2P35606 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
COPB2P35606 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 AC010141.1-201ENST00000411585 623 ntBASIC17.22■□□□□ 0.35
COPB2P35606 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 SPTLC1P5-201ENST00000450718 252 ntBASIC17.22■□□□□ 0.35
COPB2P35606 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.22■□□□□ 0.35
COPB2P35606 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.22■□□□□ 0.35
COPB2P35606 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.22■□□□□ 0.35
COPB2P35606 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.22■□□□□ 0.35
COPB2P35606 AC105129.2-201ENST00000559536 390 ntBASIC17.22■□□□□ 0.35
COPB2P35606 AC100827.2-201ENST00000563214 1194 ntBASIC17.22■□□□□ 0.35
COPB2P35606 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.22■□□□□ 0.35
COPB2P35606 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.22■□□□□ 0.35
COPB2P35606 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 AP001505.2-201ENST00000616815 443 ntBASIC17.22■□□□□ 0.35
COPB2P35606 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms