Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
PTPN6P29350 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PTPN6P29350 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.4□□□□□ -0.1
PTPN6P29350 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PTPN6P29350 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.4□□□□□ -0.1
PTPN6P29350 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.4□□□□□ -0.1
PTPN6P29350 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN6P29350 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
PTPN6P29350 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PTPN6P29350 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PTPN6P29350 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PTPN6P29350 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
PTPN6P29350 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 AL928921.2-201ENST00000641325 2442 ntBASIC14.39□□□□□ -0.11
PTPN6P29350 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.39□□□□□ -0.11
PTPN6P29350 DFFBP1-201ENST00000433250 979 ntBASIC14.39□□□□□ -0.11
PTPN6P29350 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN6P29350 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN6P29350 TPRX2P-201ENST00000535362 881 ntBASIC14.39□□□□□ -0.11
PTPN6P29350 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN6P29350 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN6P29350 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN6P29350 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PTPN6P29350 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PTPN6P29350 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN6P29350 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN6P29350 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PTPN6P29350 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
PTPN6P29350 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN6P29350 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN6P29350 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN6P29350 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN6P29350 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PTPN6P29350 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.38□□□□□ -0.11
PTPN6P29350 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 AC005840.4-201ENST00000541242 2494 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.38□□□□□ -0.11
PTPN6P29350 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 LINC01230-201ENST00000625222 3017 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PTPN6P29350 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN6P29350 HLA-K-203ENST00000430151 1046 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 AL353779.1-201ENST00000434793 351 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.38□□□□□ -0.11
PTPN6P29350 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.38□□□□□ -0.11
PTPN6P29350 MEIS3P1-201ENST00000495167 958 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.38□□□□□ -0.11
PTPN6P29350 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.38□□□□□ -0.11
PTPN6P29350 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.38□□□□□ -0.11
PTPN6P29350 API5-211ENST00000534695 560 ntTSL 5 BASIC14.38□□□□□ -0.11
PTPN6P29350 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
PTPN6P29350 AC023310.3-201ENST00000557027 670 ntBASIC14.38□□□□□ -0.11
PTPN6P29350 AC100756.1-201ENST00000562736 682 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms