Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MST1L-201ENST00000442552 2185 ntBASIC12.81□□□□□ -0.36
COL8A2P25067 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.81□□□□□ -0.36
COL8A2P25067 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.81□□□□□ -0.36
COL8A2P25067 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COL8A2P25067 CICP24-201ENST00000605464 2705 ntBASIC12.81□□□□□ -0.36
COL8A2P25067 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
COL8A2P25067 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
COL8A2P25067 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
COL8A2P25067 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.8□□□□□ -0.36
COL8A2P25067 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 AL354989.2-201ENST00000435838 1540 ntBASIC12.8□□□□□ -0.36
COL8A2P25067 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.8□□□□□ -0.36
COL8A2P25067 HLA-K-203ENST00000430151 1046 ntBASIC12.8□□□□□ -0.36
COL8A2P25067 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.8□□□□□ -0.36
COL8A2P25067 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.8□□□□□ -0.36
COL8A2P25067 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.8□□□□□ -0.36
COL8A2P25067 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.8□□□□□ -0.36
COL8A2P25067 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.8□□□□□ -0.36
COL8A2P25067 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.8□□□□□ -0.36
COL8A2P25067 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
COL8A2P25067 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
COL8A2P25067 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 AL360270.3-201ENST00000609118 1348 ntBASIC12.8□□□□□ -0.36
COL8A2P25067 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
COL8A2P25067 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.8□□□□□ -0.36
COL8A2P25067 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COL8A2P25067 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
COL8A2P25067 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
COL8A2P25067 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.79□□□□□ -0.36
COL8A2P25067 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
COL8A2P25067 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.79□□□□□ -0.36
COL8A2P25067 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.79□□□□□ -0.36
COL8A2P25067 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 AC055811.4-201ENST00000624039 1754 ntBASIC12.79□□□□□ -0.36
COL8A2P25067 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.79□□□□□ -0.36
COL8A2P25067 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
COL8A2P25067 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.79□□□□□ -0.36
COL8A2P25067 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.79□□□□□ -0.36
COL8A2P25067 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.79□□□□□ -0.36
COL8A2P25067 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.79□□□□□ -0.36
COL8A2P25067 MIR4741-201ENST00000579822 90 ntBASIC12.79□□□□□ -0.36
COL8A2P25067 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 MIR6869-201ENST00000619434 62 ntBASIC12.79□□□□□ -0.36
COL8A2P25067 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms