Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH3P22223 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 DRD5P1-201ENST00000456605 1438 ntBASIC14.94□□□□□ -0.02
CDH3P22223 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH3P22223 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH3P22223 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH3P22223 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH3P22223 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CDH3P22223 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
CDH3P22223 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH3P22223 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH3P22223 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH3P22223 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH3P22223 AC026410.3-201ENST00000514280 936 ntBASIC14.94□□□□□ -0.02
CDH3P22223 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH3P22223 AC008735.3-201ENST00000596646 500 ntBASIC14.94□□□□□ -0.02
CDH3P22223 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.94□□□□□ -0.02
CDH3P22223 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH3P22223 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH3P22223 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH3P22223 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 CICP20-201ENST00000443330 2801 ntBASIC14.94□□□□□ -0.02
CDH3P22223 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CDH3P22223 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
CDH3P22223 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH3P22223 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.94□□□□□ -0.02
CDH3P22223 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CDH3P22223 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH3P22223 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH3P22223 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 KRT17P8-201ENST00000540749 863 ntBASIC14.93□□□□□ -0.02
CDH3P22223 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH3P22223 RAB43P1-201ENST00000561790 589 ntBASIC14.93□□□□□ -0.02
CDH3P22223 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH3P22223 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH3P22223 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH3P22223 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 AC093813.1-201ENST00000605066 256 ntBASIC14.93□□□□□ -0.02
CDH3P22223 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH3P22223 AL162274.1-201ENST00000617191 1098 ntBASIC14.93□□□□□ -0.02
CDH3P22223 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CDH3P22223 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDH3P22223 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH3P22223 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH3P22223 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms