Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
TNFRSF1BP20333 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 AL139400.1-201ENST00000366220 510 ntBASIC14.12□□□□□ -0.15
TNFRSF1BP20333 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 AC254562.1-201ENST00000417586 456 ntBASIC14.12□□□□□ -0.15
TNFRSF1BP20333 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 AC092865.5-201ENST00000545435 363 ntBASIC14.12□□□□□ -0.15
TNFRSF1BP20333 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.12□□□□□ -0.15
TNFRSF1BP20333 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.12□□□□□ -0.15
TNFRSF1BP20333 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 SDHAP3-202ENST00000515467 728 ntBASIC14.11□□□□□ -0.15
TNFRSF1BP20333 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 AC073592.8-201ENST00000624126 511 ntBASIC14.11□□□□□ -0.15
TNFRSF1BP20333 AC134684.3-201ENST00000641758 218 ntBASIC14.11□□□□□ -0.15
TNFRSF1BP20333 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 PTENP1-202ENST00000532280 3996 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms