Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CAPN2P17655 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN2P17655 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN2P17655 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN2P17655 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.54■□□□□ 0.4
CAPN2P17655 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN2P17655 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CAPN2P17655 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CAPN2P17655 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN2P17655 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CAPN2P17655 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN2P17655 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CAPN2P17655 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CAPN2P17655 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CAPN2P17655 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN2P17655 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CAPN2P17655 MIR1202-201ENST00000408529 83 ntBASIC17.53■□□□□ 0.4
CAPN2P17655 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN2P17655 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 HSPB1P2-201ENST00000448722 546 ntBASIC17.53■□□□□ 0.4
CAPN2P17655 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN2P17655 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.53■□□□□ 0.4
CAPN2P17655 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CAPN2P17655 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.53■□□□□ 0.4
CAPN2P17655 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.53■□□□□ 0.4
CAPN2P17655 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 AC145423.3-201ENST00000615987 467 ntBASIC17.53■□□□□ 0.4
CAPN2P17655 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.53■□□□□ 0.4
CAPN2P17655 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CAPN2P17655 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN2P17655 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN2P17655 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN2P17655 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.52■□□□□ 0.4
CAPN2P17655 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN2P17655 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CAPN2P17655 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN2P17655 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN2P17655 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN2P17655 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN2P17655 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CAPN2P17655 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CAPN2P17655 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN2P17655 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CAPN2P17655 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN2P17655 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN2P17655 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN2P17655 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.52■□□□□ 0.4
CAPN2P17655 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.52■□□□□ 0.4
CAPN2P17655 AC008267.1-201ENST00000474858 1069 ntBASIC17.52■□□□□ 0.4
CAPN2P17655 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN2P17655 IMP3P2-201ENST00000489760 475 ntBASIC17.52■□□□□ 0.4
CAPN2P17655 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.52■□□□□ 0.4
CAPN2P17655 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CAPN2P17655 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CAPN2P17655 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CAPN2P17655 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CAPN2P17655 U62317.3-201ENST00000608319 855 ntBASIC17.52■□□□□ 0.4
CAPN2P17655 AC097724.1-201ENST00000609581 426 ntBASIC17.52■□□□□ 0.4
CAPN2P17655 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
CAPN2P17655 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CAPN2P17655 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN2P17655 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CAPN2P17655 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.52■□□□□ 0.39
CAPN2P17655 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.39
CAPN2P17655 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.52■□□□□ 0.39
CAPN2P17655 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN2P17655 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CAPN2P17655 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN2P17655 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN2P17655 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN2P17655 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.51■□□□□ 0.39
CAPN2P17655 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN2P17655 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms