Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15□□□□□ -0.01
COL6A2P12110 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15□□□□□ -0.01
COL6A2P12110 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15□□□□□ -0.01
COL6A2P12110 NUS1P3-201ENST00000423502 862 ntBASIC15□□□□□ -0.01
COL6A2P12110 DNAJB3-202ENST00000449667 1266 ntBASIC15□□□□□ -0.01
COL6A2P12110 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15□□□□□ -0.01
COL6A2P12110 AC026410.3-201ENST00000514280 936 ntBASIC15□□□□□ -0.01
COL6A2P12110 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
COL6A2P12110 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15□□□□□ -0.01
COL6A2P12110 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15□□□□□ -0.01
COL6A2P12110 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
COL6A2P12110 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
COL6A2P12110 AC004449.1-201ENST00000564240 433 ntBASIC15□□□□□ -0.01
COL6A2P12110 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
COL6A2P12110 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15□□□□□ -0.01
COL6A2P12110 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
COL6A2P12110 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
COL6A2P12110 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 AL354702.1-201ENST00000442006 1960 ntBASIC15□□□□□ -0.01
COL6A2P12110 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
COL6A2P12110 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
COL6A2P12110 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
COL6A2P12110 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
COL6A2P12110 AL158070.2-201ENST00000623713 1621 ntBASIC14.99□□□□□ -0.01
COL6A2P12110 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
COL6A2P12110 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
COL6A2P12110 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.99□□□□□ -0.01
COL6A2P12110 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.99□□□□□ -0.01
COL6A2P12110 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
COL6A2P12110 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
COL6A2P12110 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
COL6A2P12110 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
COL6A2P12110 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.99□□□□□ -0.01
COL6A2P12110 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.99□□□□□ -0.01
COL6A2P12110 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.99□□□□□ -0.01
COL6A2P12110 AC009477.1-201ENST00000452936 217 ntBASIC14.99□□□□□ -0.01
COL6A2P12110 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.99□□□□□ -0.01
COL6A2P12110 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.99□□□□□ -0.01
COL6A2P12110 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.99□□□□□ -0.01
COL6A2P12110 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
COL6A2P12110 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.99□□□□□ -0.01
COL6A2P12110 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.99□□□□□ -0.01
COL6A2P12110 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.99□□□□□ -0.01
COL6A2P12110 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.99□□□□□ -0.01
COL6A2P12110 AC079781.4-201ENST00000641908 219 ntBASIC14.99□□□□□ -0.01
COL6A2P12110 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
COL6A2P12110 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
COL6A2P12110 AC023090.2-201ENST00000625182 2110 ntBASIC14.99□□□□□ -0.01
COL6A2P12110 AL138799.1-201ENST00000448213 1675 ntBASIC14.99□□□□□ -0.01
COL6A2P12110 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 AL137783.1-201ENST00000623494 1896 ntBASIC14.99□□□□□ -0.01
COL6A2P12110 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
COL6A2P12110 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.99□□□□□ -0.01
COL6A2P12110 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.99□□□□□ -0.01
COL6A2P12110 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL6A2P12110 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.98□□□□□ -0.01
COL6A2P12110 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.98□□□□□ -0.01
COL6A2P12110 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.98□□□□□ -0.01
COL6A2P12110 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.98□□□□□ -0.01
COL6A2P12110 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL6A2P12110 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms