Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
THRAP10827 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 AC079776.1-201ENST00000401540 1152 ntBASIC15.29■□□□□ 0.04
THRAP10827 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.29■□□□□ 0.04
THRAP10827 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.29■□□□□ 0.04
THRAP10827 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 AC104596.2-201ENST00000512793 793 ntBASIC15.29■□□□□ 0.04
THRAP10827 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
THRAP10827 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.29■□□□□ 0.04
THRAP10827 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.29■□□□□ 0.04
THRAP10827 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.29■□□□□ 0.04
THRAP10827 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
THRAP10827 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.29■□□□□ 0.04
THRAP10827 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.29■□□□□ 0.04
THRAP10827 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.29■□□□□ 0.04
THRAP10827 AL391069.4-201ENST00000609583 481 ntBASIC15.29■□□□□ 0.04
THRAP10827 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.29■□□□□ 0.04
THRAP10827 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 AC067750.1-201ENST00000608826 6545 ntBASIC15.29■□□□□ 0.04
THRAP10827 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THRAP10827 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
THRAP10827 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.28■□□□□ 0.04
THRAP10827 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.28■□□□□ 0.04
THRAP10827 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
THRAP10827 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
THRAP10827 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 RPL13P2-201ENST00000440687 659 ntBASIC15.28■□□□□ 0.04
THRAP10827 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.28■□□□□ 0.04
THRAP10827 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 ACA64.2-201ENST00000459014 129 ntBASIC15.28■□□□□ 0.04
THRAP10827 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.28■□□□□ 0.04
THRAP10827 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.28■□□□□ 0.04
THRAP10827 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.28■□□□□ 0.04
THRAP10827 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.28■□□□□ 0.04
THRAP10827 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.28■□□□□ 0.04
THRAP10827 AC017083.2-201ENST00000608069 979 ntBASIC15.28■□□□□ 0.04
THRAP10827 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.28■□□□□ 0.04
THRAP10827 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
THRAP10827 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
THRAP10827 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
THRAP10827 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.28■□□□□ 0.04
THRAP10827 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
THRAP10827 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.28■□□□□ 0.04
THRAP10827 BNIP3P1-202ENST00000550043 1585 ntBASIC15.28■□□□□ 0.04
THRAP10827 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THRAP10827 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THRAP10827 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
THRAP10827 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
THRAP10827 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.27■□□□□ 0.04
THRAP10827 REXO1L1P-202ENST00000608646 1974 ntBASIC15.27■□□□□ 0.04
THRAP10827 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.27■□□□□ 0.04
THRAP10827 CLK3P2-201ENST00000427566 1453 ntBASIC15.27■□□□□ 0.04
THRAP10827 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
THRAP10827 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
THRAP10827 AC140479.7-201ENST00000636301 2332 ntBASIC15.27■□□□□ 0.04
THRAP10827 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THRAP10827 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.27■□□□□ 0.04
THRAP10827 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
THRAP10827 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THRAP10827 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THRAP10827 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms