Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 RPS8P6-201ENST00000426177 609 ntBASIC11.38□□□□□ -0.59
SMIM17P0DL12 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AC079776.4-201ENST00000511039 504 ntBASIC11.38□□□□□ -0.59
SMIM17P0DL12 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AC073389.1-201ENST00000595595 795 ntBASIC11.38□□□□□ -0.59
SMIM17P0DL12 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 AC148477.8-201ENST00000624298 468 ntBASIC11.38□□□□□ -0.59
SMIM17P0DL12 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM17P0DL12 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM17P0DL12 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms