Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.15■□□□□ 0.18
FAM228BP0C875 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 OR2I1P-210ENST00000642037 4691 ntBASIC16.15■□□□□ 0.18
FAM228BP0C875 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 AL645937.2-201ENST00000396808 931 ntBASIC16.15■□□□□ 0.18
FAM228BP0C875 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.15■□□□□ 0.18
FAM228BP0C875 METTL21AP1-201ENST00000438852 635 ntBASIC16.15■□□□□ 0.18
FAM228BP0C875 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.15■□□□□ 0.18
FAM228BP0C875 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.15■□□□□ 0.18
FAM228BP0C875 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 VDAC1P7-201ENST00000462417 847 ntBASIC16.15■□□□□ 0.18
FAM228BP0C875 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.15■□□□□ 0.18
FAM228BP0C875 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.15■□□□□ 0.18
FAM228BP0C875 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.15■□□□□ 0.18
FAM228BP0C875 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.15■□□□□ 0.18
FAM228BP0C875 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
FAM228BP0C875 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
FAM228BP0C875 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FAM228BP0C875 AC023511.2-201ENST00000618803 211 ntBASIC16.15■□□□□ 0.18
FAM228BP0C875 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
FAM228BP0C875 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.15■□□□□ 0.18
FAM228BP0C875 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.15■□□□□ 0.18
FAM228BP0C875 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.15■□□□□ 0.18
FAM228BP0C875 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
FAM228BP0C875 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM228BP0C875 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.15■□□□□ 0.18
FAM228BP0C875 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
FAM228BP0C875 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
FAM228BP0C875 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.18
FAM228BP0C875 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.14■□□□□ 0.18
FAM228BP0C875 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
FAM228BP0C875 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.14■□□□□ 0.17
FAM228BP0C875 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 AC104581.4-201ENST00000623126 3052 ntBASIC16.14■□□□□ 0.17
FAM228BP0C875 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.14■□□□□ 0.17
FAM228BP0C875 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.14■□□□□ 0.17
FAM228BP0C875 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.14■□□□□ 0.17
FAM228BP0C875 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.14■□□□□ 0.17
FAM228BP0C875 MRPS18AP1-201ENST00000414458 589 ntBASIC16.14■□□□□ 0.17
FAM228BP0C875 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.14■□□□□ 0.17
FAM228BP0C875 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.14■□□□□ 0.17
FAM228BP0C875 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.14■□□□□ 0.17
FAM228BP0C875 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.14■□□□□ 0.17
FAM228BP0C875 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.14■□□□□ 0.17
FAM228BP0C875 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.14■□□□□ 0.17
FAM228BP0C875 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM228BP0C875 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
FAM228BP0C875 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM228BP0C875 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM228BP0C875 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FAM228BP0C875 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FAM228BP0C875 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM228BP0C875 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FAM228BP0C875 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms