Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CROCCP4-201ENST00000457096 498 ntBASIC15.19■□□□□ 0.02
MMP2P08253 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.19■□□□□ 0.02
MMP2P08253 ECM1P1-201ENST00000604092 1279 ntBASIC15.19■□□□□ 0.02
MMP2P08253 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP2P08253 AC232323.1-201ENST00000540724 2099 ntBASIC15.19■□□□□ 0.02
MMP2P08253 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.19■□□□□ 0.02
MMP2P08253 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MMP2P08253 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.19■□□□□ 0.02
MMP2P08253 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MMP2P08253 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.18■□□□□ 0.02
MMP2P08253 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.18■□□□□ 0.02
MMP2P08253 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
MMP2P08253 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MMP2P08253 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.18■□□□□ 0.02
MMP2P08253 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.18■□□□□ 0.02
MMP2P08253 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 AC079776.1-201ENST00000401540 1152 ntBASIC15.18■□□□□ 0.02
MMP2P08253 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.18■□□□□ 0.02
MMP2P08253 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.18■□□□□ 0.02
MMP2P08253 CNN2P8-201ENST00000421872 913 ntBASIC15.18■□□□□ 0.02
MMP2P08253 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.18■□□□□ 0.02
MMP2P08253 AC005034.1-201ENST00000426657 489 ntBASIC15.18■□□□□ 0.02
MMP2P08253 FAM197Y7-201ENST00000432892 766 ntBASIC15.18■□□□□ 0.02
MMP2P08253 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MMP2P08253 AC007551.1-201ENST00000457394 519 ntBASIC15.18■□□□□ 0.02
MMP2P08253 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MMP2P08253 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.18■□□□□ 0.02
MMP2P08253 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.18■□□□□ 0.02
MMP2P08253 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.18■□□□□ 0.02
MMP2P08253 AC138696.2-201ENST00000607376 223 ntBASIC15.18■□□□□ 0.02
MMP2P08253 AC138466.3-201ENST00000619983 221 ntBASIC15.18■□□□□ 0.02
MMP2P08253 AL035252.4-201ENST00000624174 288 ntBASIC15.18■□□□□ 0.02
MMP2P08253 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.18■□□□□ 0.02
MMP2P08253 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MMP2P08253 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.18■□□□□ 0.02
MMP2P08253 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.18■□□□□ 0.02
MMP2P08253 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.18■□□□□ 0.02
MMP2P08253 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MMP2P08253 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 AC011840.2-201ENST00000563063 1520 ntBASIC15.17■□□□□ 0.02
MMP2P08253 AC099063.4-201ENST00000641099 1602 ntBASIC15.17■□□□□ 0.02
MMP2P08253 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
MMP2P08253 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MMP2P08253 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.17■□□□□ 0.02
MMP2P08253 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 AC007969.1-201ENST00000433675 447 ntBASIC15.17■□□□□ 0.02
MMP2P08253 AC016694.1-201ENST00000434179 700 ntBASIC15.17■□□□□ 0.02
MMP2P08253 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.17■□□□□ 0.02
MMP2P08253 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 AL391280.1-201ENST00000506969 1062 ntBASIC15.17■□□□□ 0.02
MMP2P08253 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MMP2P08253 AP003171.2-201ENST00000528208 925 ntBASIC15.17■□□□□ 0.02
MMP2P08253 KRT90P-201ENST00000549264 1064 ntBASIC15.17■□□□□ 0.02
MMP2P08253 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.17■□□□□ 0.02
MMP2P08253 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 AC106886.1-201ENST00000568660 600 ntBASIC15.17■□□□□ 0.02
MMP2P08253 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.17■□□□□ 0.02
MMP2P08253 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms