Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFBP01127 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.97□□□□□ -0.01
PDGFBP01127 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFBP01127 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.97□□□□□ -0.01
PDGFBP01127 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PDGFBP01127 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.97□□□□□ -0.01
PDGFBP01127 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFBP01127 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFBP01127 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFBP01127 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PDGFBP01127 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.97□□□□□ -0.01
PDGFBP01127 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.97□□□□□ -0.01
PDGFBP01127 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.97□□□□□ -0.01
PDGFBP01127 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 AC244197.1-201ENST00000456494 951 ntBASIC14.97□□□□□ -0.01
PDGFBP01127 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.97□□□□□ -0.01
PDGFBP01127 AC114947.1-202ENST00000514136 344 ntBASIC14.97□□□□□ -0.01
PDGFBP01127 RNA5SP417-201ENST00000516459 108 ntBASIC14.97□□□□□ -0.01
PDGFBP01127 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFBP01127 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PDGFBP01127 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PDGFBP01127 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PDGFBP01127 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PDGFBP01127 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PDGFBP01127 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PDGFBP01127 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PDGFBP01127 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PDGFBP01127 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFBP01127 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFBP01127 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFBP01127 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PDGFBP01127 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.96□□□□□ -0.01
PDGFBP01127 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PDGFBP01127 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.96□□□□□ -0.01
PDGFBP01127 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.96□□□□□ -0.01
PDGFBP01127 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.96□□□□□ -0.01
PDGFBP01127 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PDGFBP01127 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PDGFBP01127 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PDGFBP01127 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.96□□□□□ -0.01
PDGFBP01127 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PDGFBP01127 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PDGFBP01127 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.96□□□□□ -0.01
PDGFBP01127 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.96□□□□□ -0.01
PDGFBP01127 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.96□□□□□ -0.01
PDGFBP01127 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFBP01127 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDGFBP01127 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
PDGFBP01127 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.96□□□□□ -0.02
PDGFBP01127 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDGFBP01127 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PDGFBP01127 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDGFBP01127 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDGFBP01127 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDGFBP01127 AC092127.1-201ENST00000567093 3455 ntBASIC14.96□□□□□ -0.02
PDGFBP01127 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 AL139384.1-201ENST00000612143 3047 ntBASIC14.95□□□□□ -0.02
PDGFBP01127 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PDGFBP01127 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
PDGFBP01127 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFBP01127 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PDGFBP01127 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFBP01127 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
PDGFBP01127 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms