Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC3O95833 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIC3O95833 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 KRT8P24-201ENST00000560290 1559 ntBASIC14.05□□□□□ -0.16
CLIC3O95833 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC3O95833 AL118506.1-201ENST00000601296 3082 ntBASIC14.05□□□□□ -0.16
CLIC3O95833 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLIC3O95833 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CLIC3O95833 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 AC142381.1-201ENST00000426099 345 ntBASIC14.05□□□□□ -0.16
CLIC3O95833 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.05□□□□□ -0.16
CLIC3O95833 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC3O95833 UNC93B6-202ENST00000528242 690 ntBASIC14.05□□□□□ -0.16
CLIC3O95833 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC3O95833 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.05□□□□□ -0.16
CLIC3O95833 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.05□□□□□ -0.16
CLIC3O95833 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 MIR497HG-202ENST00000572453 3838 ntBASIC14.05□□□□□ -0.16
CLIC3O95833 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC3O95833 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC3O95833 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC3O95833 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIC3O95833 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIC3O95833 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIC3O95833 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIC3O95833 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLIC3O95833 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLIC3O95833 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 AC020658.7-201ENST00000624274 2442 ntBASIC14.04□□□□□ -0.16
CLIC3O95833 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CLIC3O95833 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.04□□□□□ -0.16
CLIC3O95833 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIC3O95833 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIC3O95833 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CLIC3O95833 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLIC3O95833 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.04□□□□□ -0.16
CLIC3O95833 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 FAM197Y8-203ENST00000450145 560 ntBASIC14.04□□□□□ -0.16
CLIC3O95833 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CLIC3O95833 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.04□□□□□ -0.16
CLIC3O95833 AL662844.1-201ENST00000546340 181 ntBASIC14.04□□□□□ -0.16
CLIC3O95833 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.04□□□□□ -0.16
CLIC3O95833 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIC3O95833 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLIC3O95833 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CLIC3O95833 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIC3O95833 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIC3O95833 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.04□□□□□ -0.16
CLIC3O95833 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.04□□□□□ -0.16
CLIC3O95833 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLIC3O95833 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms