Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
GGPS1O95749 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GGPS1O95749 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GGPS1O95749 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.94■□□□□ 0.3
GGPS1O95749 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.94■□□□□ 0.3
GGPS1O95749 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.94■□□□□ 0.3
GGPS1O95749 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.94■□□□□ 0.3
GGPS1O95749 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GGPS1O95749 C18orf15-201ENST00000623680 2534 ntBASIC16.94■□□□□ 0.3
GGPS1O95749 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GGPS1O95749 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.94■□□□□ 0.3
GGPS1O95749 CALR4P-201ENST00000431943 946 ntBASIC16.94■□□□□ 0.3
GGPS1O95749 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.94■□□□□ 0.3
GGPS1O95749 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 MIR4683-201ENST00000579659 81 ntBASIC16.94■□□□□ 0.3
GGPS1O95749 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.94■□□□□ 0.3
GGPS1O95749 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
GGPS1O95749 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.94■□□□□ 0.3
GGPS1O95749 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.94■□□□□ 0.3
GGPS1O95749 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GGPS1O95749 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.94■□□□□ 0.3
GGPS1O95749 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GGPS1O95749 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GGPS1O95749 AC136621.1-201ENST00000624017 2304 ntBASIC16.93■□□□□ 0.3
GGPS1O95749 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.93■□□□□ 0.3
GGPS1O95749 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 AC112693.3-201ENST00000624819 1983 ntBASIC16.93■□□□□ 0.3
GGPS1O95749 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
GGPS1O95749 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GGPS1O95749 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
GGPS1O95749 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GGPS1O95749 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GGPS1O95749 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
GGPS1O95749 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 AKR7A2P1-201ENST00000460134 915 ntBASIC16.93■□□□□ 0.3
GGPS1O95749 AC126915.1-201ENST00000522847 1038 ntBASIC16.93■□□□□ 0.3
GGPS1O95749 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.93■□□□□ 0.3
GGPS1O95749 AC005730.2-201ENST00000564549 1184 ntBASIC16.93■□□□□ 0.3
GGPS1O95749 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.93■□□□□ 0.3
GGPS1O95749 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.93■□□□□ 0.3
GGPS1O95749 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.93■□□□□ 0.3
GGPS1O95749 AC007663.3-201ENST00000609632 465 ntBASIC16.93■□□□□ 0.3
GGPS1O95749 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 AP000593.2-201ENST00000542775 1433 ntBASIC16.93■□□□□ 0.3
GGPS1O95749 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GGPS1O95749 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GGPS1O95749 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.93■□□□□ 0.3
GGPS1O95749 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GGPS1O95749 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.93■□□□□ 0.3
GGPS1O95749 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
GGPS1O95749 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GGPS1O95749 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GGPS1O95749 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GGPS1O95749 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GGPS1O95749 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GGPS1O95749 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
GGPS1O95749 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GGPS1O95749 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
GGPS1O95749 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.92■□□□□ 0.3
GGPS1O95749 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.92■□□□□ 0.3
GGPS1O95749 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GGPS1O95749 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
GGPS1O95749 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms