Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CPNE3O75131 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.64□□□□□ -0.07
CPNE3O75131 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 YBX1P6-201ENST00000442962 1002 ntBASIC14.64□□□□□ -0.07
CPNE3O75131 AL355994.2-201ENST00000447882 704 ntBASIC14.64□□□□□ -0.07
CPNE3O75131 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.64□□□□□ -0.07
CPNE3O75131 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.64□□□□□ -0.07
CPNE3O75131 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.64□□□□□ -0.07
CPNE3O75131 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.64□□□□□ -0.07
CPNE3O75131 GNRHR2-203ENST00000581100 1187 ntBASIC14.64□□□□□ -0.07
CPNE3O75131 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 AC244669.2-201ENST00000612320 853 ntBASIC14.64□□□□□ -0.07
CPNE3O75131 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CPNE3O75131 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.64□□□□□ -0.07
CPNE3O75131 AC112504.1-201ENST00000623415 1841 ntBASIC14.64□□□□□ -0.07
CPNE3O75131 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.64□□□□□ -0.07
CPNE3O75131 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 TUBB1P2-201ENST00000422712 1306 ntBASIC14.64□□□□□ -0.07
CPNE3O75131 KRT8P35-201ENST00000483942 1338 ntBASIC14.64□□□□□ -0.07
CPNE3O75131 TUBB1P1-201ENST00000503144 1300 ntBASIC14.64□□□□□ -0.07
CPNE3O75131 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE3O75131 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CPNE3O75131 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.63□□□□□ -0.07
CPNE3O75131 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CPNE3O75131 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.63□□□□□ -0.07
CPNE3O75131 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.63□□□□□ -0.07
CPNE3O75131 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.63□□□□□ -0.07
CPNE3O75131 AL583810.1-201ENST00000553344 1045 ntBASIC14.63□□□□□ -0.07
CPNE3O75131 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.63□□□□□ -0.07
CPNE3O75131 AC025279.2-201ENST00000569730 653 ntBASIC14.63□□□□□ -0.07
CPNE3O75131 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.63□□□□□ -0.07
CPNE3O75131 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CPNE3O75131 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CPNE3O75131 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.63□□□□□ -0.07
CPNE3O75131 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CPNE3O75131 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.63□□□□□ -0.07
CPNE3O75131 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.63□□□□□ -0.07
CPNE3O75131 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CPNE3O75131 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CPNE3O75131 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPNE3O75131 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 FAM86MP-201ENST00000340703 885 ntBASIC14.62□□□□□ -0.07
CPNE3O75131 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms