Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNA1FO60840 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA1FO60840 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA1FO60840 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CACNA1FO60840 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CACNA1FO60840 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNA1FO60840 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNA1FO60840 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CACNA1FO60840 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA1FO60840 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA1FO60840 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.66■□□□□ 0.58
CACNA1FO60840 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1FO60840 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1FO60840 MYADML-201ENST00000474610 2147 ntBASIC18.65■□□□□ 0.58
CACNA1FO60840 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CACNA1FO60840 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1FO60840 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNA1FO60840 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CACNA1FO60840 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CACNA1FO60840 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 RN7SKP214-201ENST00000364208 315 ntBASIC18.65■□□□□ 0.58
CACNA1FO60840 AC016700.1-201ENST00000429424 312 ntBASIC18.65■□□□□ 0.58
CACNA1FO60840 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1FO60840 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 AC008805.1-201ENST00000590892 364 ntBASIC18.65■□□□□ 0.58
CACNA1FO60840 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNA1FO60840 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNA1FO60840 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CACNA1FO60840 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1FO60840 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1FO60840 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CACNA1FO60840 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1FO60840 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CACNA1FO60840 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CACNA1FO60840 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CACNA1FO60840 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CACNA1FO60840 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CACNA1FO60840 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC18.64■□□□□ 0.58
CACNA1FO60840 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CACNA1FO60840 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.64■□□□□ 0.58
CACNA1FO60840 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.64■□□□□ 0.58
CACNA1FO60840 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.58
CACNA1FO60840 MIR6720-201ENST00000611664 98 ntBASIC18.64■□□□□ 0.58
CACNA1FO60840 AC091544.8-201ENST00000619490 361 ntBASIC18.64■□□□□ 0.58
CACNA1FO60840 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.58
CACNA1FO60840 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC18.64■□□□□ 0.58
CACNA1FO60840 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CACNA1FO60840 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 AHCYP4-201ENST00000419201 1315 ntBASIC18.64■□□□□ 0.57
CACNA1FO60840 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNA1FO60840 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 PDIA3P2-201ENST00000428073 158 ntBASIC18.64■□□□□ 0.57
CACNA1FO60840 AL161932.2-201ENST00000435436 679 ntBASIC18.64■□□□□ 0.57
CACNA1FO60840 TUBB8P8-201ENST00000458717 1058 ntBASIC18.64■□□□□ 0.57
CACNA1FO60840 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CACNA1FO60840 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CACNA1FO60840 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNA1FO60840 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CACNA1FO60840 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CACNA1FO60840 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.64■□□□□ 0.57
CACNA1FO60840 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNA1FO60840 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CACNA1FO60840 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CACNA1FO60840 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1FO60840 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms