Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 INE2-201ENST00000630399 1874 ntBASIC17.26■□□□□ 0.35
ATP2A1O14983 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP2A1O14983 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A1O14983 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ATP2A1O14983 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP2A1O14983 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ATP2A1O14983 AL138725.1-201ENST00000407347 1314 ntBASIC17.25■□□□□ 0.35
ATP2A1O14983 TUBBP5-203ENST00000508529 1334 ntBASIC17.25■□□□□ 0.35
ATP2A1O14983 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP2A1O14983 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATP2A1O14983 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ATP2A1O14983 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP2A1O14983 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ATP2A1O14983 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.25■□□□□ 0.35
ATP2A1O14983 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATP2A1O14983 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 AL662890.1-201ENST00000396818 632 ntBASIC17.25■□□□□ 0.35
ATP2A1O14983 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.25■□□□□ 0.35
ATP2A1O14983 EIF4HP1-201ENST00000453115 687 ntBASIC17.25■□□□□ 0.35
ATP2A1O14983 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP2A1O14983 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP2A1O14983 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP2A1O14983 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.25■□□□□ 0.35
ATP2A1O14983 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
ATP2A1O14983 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.25■□□□□ 0.35
ATP2A1O14983 AL021578.1-201ENST00000613646 709 ntBASIC17.25■□□□□ 0.35
ATP2A1O14983 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ATP2A1O14983 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.25■□□□□ 0.35
ATP2A1O14983 AC138627.1-207ENST00000641560 1006 ntBASIC17.25■□□□□ 0.35
ATP2A1O14983 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP2A1O14983 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ATP2A1O14983 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A1O14983 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A1O14983 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A1O14983 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A1O14983 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A1O14983 AC007950.2-201ENST00000615045 2347 ntBASIC17.24■□□□□ 0.35
ATP2A1O14983 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATP2A1O14983 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A1O14983 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ATP2A1O14983 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A1O14983 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP2A1O14983 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.24■□□□□ 0.35
ATP2A1O14983 RNA5SP423-201ENST00000517127 109 ntBASIC17.24■□□□□ 0.35
ATP2A1O14983 AC022217.1-201ENST00000521069 738 ntBASIC17.24■□□□□ 0.35
ATP2A1O14983 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A1O14983 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP2A1O14983 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 AC008825.2-201ENST00000603374 718 ntBASIC17.24■□□□□ 0.35
ATP2A1O14983 AL136301.1-201ENST00000615830 422 ntBASIC17.24■□□□□ 0.35
ATP2A1O14983 AC011840.2-201ENST00000563063 1520 ntBASIC17.24■□□□□ 0.35
ATP2A1O14983 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A1O14983 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATP2A1O14983 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A1O14983 SHC1P1-201ENST00000425230 1745 ntBASIC17.24■□□□□ 0.35
ATP2A1O14983 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A1O14983 AC009093.2-202ENST00000620513 2079 ntBASIC17.24■□□□□ 0.35
ATP2A1O14983 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A1O14983 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A1O14983 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms