Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
UPK2O00526 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK2O00526 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK2O00526 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK2O00526 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK2O00526 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
UPK2O00526 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.18□□□□□ -0.46
UPK2O00526 HLA-K-203ENST00000430151 1046 ntBASIC12.18□□□□□ -0.46
UPK2O00526 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.18□□□□□ -0.46
UPK2O00526 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.18□□□□□ -0.46
UPK2O00526 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.18□□□□□ -0.46
UPK2O00526 AC026410.3-201ENST00000514280 936 ntBASIC12.18□□□□□ -0.46
UPK2O00526 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.18□□□□□ -0.46
UPK2O00526 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 DUX4L27-201ENST00000554796 1261 ntBASIC12.18□□□□□ -0.46
UPK2O00526 RARRES2P5-201ENST00000564013 466 ntBASIC12.18□□□□□ -0.46
UPK2O00526 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.18□□□□□ -0.46
UPK2O00526 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 AL138799.1-201ENST00000448213 1675 ntBASIC12.18□□□□□ -0.46
UPK2O00526 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
UPK2O00526 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 AC015802.1-201ENST00000588104 1449 ntBASIC12.18□□□□□ -0.46
UPK2O00526 AL158070.2-201ENST00000623713 1621 ntBASIC12.18□□□□□ -0.46
UPK2O00526 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UPK2O00526 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
UPK2O00526 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
UPK2O00526 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 AL137783.1-201ENST00000623494 1896 ntBASIC12.17□□□□□ -0.46
UPK2O00526 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.17□□□□□ -0.46
UPK2O00526 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.17□□□□□ -0.46
UPK2O00526 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms