Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 SBF1P1-201ENST00000444527 5631 ntBASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 AC023090.2-201ENST00000625182 2110 ntBASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM90A16PA6NEW6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 AL354702.1-201ENST00000442006 1960 ntBASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 AC136759.1-202ENST00000530858 2194 ntBASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 MEP1AP4-201ENST00000423244 1087 ntBASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 AC093214.1-201ENST00000511688 1107 ntBASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 AC009407.1-201ENST00000568958 598 ntBASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 AL049840.4-201ENST00000602422 811 ntBASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 AC152010.1-201ENST00000415779 2006 ntBASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 AP001267.2-201ENST00000532619 2086 ntBASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
FAM90A16PA6NEW6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 AL512638.1-201ENST00000457493 794 ntBASIC12.75□□□□□ -0.37
FAM90A16PA6NEW6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms