Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 LINC00528-201ENST00000600723 2160 ntBASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 SPDYE19P-201ENST00000338590 713 ntBASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 AC000095.1-201ENST00000603208 874 ntBASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV1A0A0A0MS02 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms