Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 AC015656.1-201ENST00000624209 3578 ntBASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 SLC7A15P-201ENST00000424028 1363 ntBASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 AL139010.1-201ENST00000454878 894 ntBASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 MIR8072-201ENST00000614241 80 ntBASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DDX49Q9Y6V7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 ARSEP1-201ENST00000420443 635 ntBASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
DDX49Q9Y6V7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DDX49Q9Y6V7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.3■□□□□ 0.52
DDX49Q9Y6V7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DDX49Q9Y6V7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX49Q9Y6V7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX49Q9Y6V7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DDX49Q9Y6V7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX49Q9Y6V7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.3■□□□□ 0.52
DDX49Q9Y6V7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms