Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 AL035456.1-201ENST00000456064 1369 ntBASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 MTND6P24-201ENST00000440466 518 ntBASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
R3HCC1Q9Y3T6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 AC107890.1-201ENST00000422478 521 ntBASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 AC007967.4-201ENST00000614700 386 ntBASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 AC092135.3-201ENST00000624151 1846 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms