Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 KRT18P43-201ENST00000469825 1281 ntBASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 TIMM17BP1-201ENST00000545713 516 ntBASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 GPALPP1-207ENST00000611650 899 ntBASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 AC138969.3-201ENST00000546612 1459 ntBASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 AC138932.2-201ENST00000548268 1459 ntBASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 AC126755.4-201ENST00000549796 1459 ntBASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RHBDD3Q9Y3P4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 AC104457.1-201ENST00000401024 814 ntBASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 AC009477.1-201ENST00000452936 217 ntBASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 AC009407.1-201ENST00000568958 598 ntBASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 BX640514.1-201ENST00000583223 1918 ntBASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RHBDD3Q9Y3P4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms